Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.31■□□□□ 0.68
Ttc3O88196 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ttc3O88196 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.3■□□□□ 0.68
Ttc3O88196 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.3■□□□□ 0.68
Ttc3O88196 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Gm15375-201ENSMUST00000119510 849 ntBASIC19.3■□□□□ 0.68
Ttc3O88196 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc3O88196 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.29■□□□□ 0.68
Ttc3O88196 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ttc3O88196 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ttc3O88196 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc3O88196 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.28■□□□□ 0.68
Ttc3O88196 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Gm42545-201ENSMUST00000202755 922 ntBASIC19.28■□□□□ 0.68
Ttc3O88196 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.28■□□□□ 0.68
Ttc3O88196 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.28■□□□□ 0.68
Ttc3O88196 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ttc3O88196 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Ttc3O88196 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Ttc3O88196 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Ttc3O88196 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc3O88196 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ttc3O88196 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.28■□□□□ 0.68
Ttc3O88196 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc3O88196 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.27■□□□□ 0.68
Ttc3O88196 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc3O88196 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc3O88196 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Ttc3O88196 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.27■□□□□ 0.68
Ttc3O88196 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.27■□□□□ 0.68
Ttc3O88196 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc3O88196 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ttc3O88196 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc3O88196 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc3O88196 BC021767-201ENSMUST00000126387 1716 ntBASIC19.27■□□□□ 0.67
Ttc3O88196 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ttc3O88196 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.26■□□□□ 0.67
Ttc3O88196 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ttc3O88196 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.26■□□□□ 0.67
Ttc3O88196 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ttc3O88196 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc3O88196 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc3O88196 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.26■□□□□ 0.67
Ttc3O88196 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc3O88196 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc3O88196 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc3O88196 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.26■□□□□ 0.67
Ttc3O88196 Gm37292-201ENSMUST00000192062 758 ntBASIC19.26■□□□□ 0.67
Ttc3O88196 Gm10138-203ENSMUST00000206952 366 ntBASIC19.26■□□□□ 0.67
Ttc3O88196 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ttc3O88196 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc3O88196 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ttc3O88196 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc3O88196 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc3O88196 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.25■□□□□ 0.67
Ttc3O88196 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ttc3O88196 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc3O88196 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc3O88196 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ttc3O88196 Gm13836-201ENSMUST00000121159 501 ntBASIC19.24■□□□□ 0.67
Ttc3O88196 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc3O88196 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc3O88196 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ttc3O88196 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc3O88196 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ttc3O88196 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.24■□□□□ 0.67
Ttc3O88196 Gm43183-201ENSMUST00000200632 547 ntBASIC19.24■□□□□ 0.67
Ttc3O88196 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc3O88196 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc3O88196 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc3O88196 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc3O88196 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.23■□□□□ 0.67
Ttc3O88196 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms