Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim1O70400 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.08■□□□□ 0.48
Pdlim1O70400 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.08■□□□□ 0.48
Pdlim1O70400 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim1O70400 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pdlim1O70400 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pdlim1O70400 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdlim1O70400 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.07■□□□□ 0.48
Pdlim1O70400 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pdlim1O70400 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pdlim1O70400 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.07■□□□□ 0.48
Pdlim1O70400 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.07■□□□□ 0.48
Pdlim1O70400 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pdlim1O70400 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdlim1O70400 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pdlim1O70400 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.06■□□□□ 0.48
Pdlim1O70400 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.06■□□□□ 0.48
Pdlim1O70400 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pdlim1O70400 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pdlim1O70400 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pdlim1O70400 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.06■□□□□ 0.48
Pdlim1O70400 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdlim1O70400 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim1O70400 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim1O70400 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim1O70400 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim1O70400 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.05■□□□□ 0.48
Pdlim1O70400 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pdlim1O70400 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.05■□□□□ 0.48
Pdlim1O70400 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim1O70400 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.05■□□□□ 0.48
Pdlim1O70400 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.05■□□□□ 0.48
Pdlim1O70400 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdlim1O70400 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim1O70400 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim1O70400 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim1O70400 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.04■□□□□ 0.48
Pdlim1O70400 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.04■□□□□ 0.48
Pdlim1O70400 Gm2399-201ENSMUST00000104944 225 ntBASIC18.04■□□□□ 0.48
Pdlim1O70400 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim1O70400 Gm29257-201ENSMUST00000186115 639 ntBASIC18.04■□□□□ 0.48
Pdlim1O70400 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pdlim1O70400 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pdlim1O70400 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.04■□□□□ 0.48
Pdlim1O70400 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim1O70400 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim1O70400 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim1O70400 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim1O70400 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim1O70400 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim1O70400 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim1O70400 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.03■□□□□ 0.48
Pdlim1O70400 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim1O70400 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim1O70400 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.02■□□□□ 0.48
Pdlim1O70400 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.02■□□□□ 0.48
Pdlim1O70400 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.02■□□□□ 0.48
Pdlim1O70400 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim1O70400 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim1O70400 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.02■□□□□ 0.48
Pdlim1O70400 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim1O70400 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim1O70400 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pdlim1O70400 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.02■□□□□ 0.47
Pdlim1O70400 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim1O70400 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdlim1O70400 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.01■□□□□ 0.47
Pdlim1O70400 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms