Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Trdmt1O55055 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.29■□□□□ 0.84
Trdmt1O55055 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.29■□□□□ 0.84
Trdmt1O55055 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.29■□□□□ 0.84
Trdmt1O55055 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trdmt1O55055 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Trdmt1O55055 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.29■□□□□ 0.84
Trdmt1O55055 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trdmt1O55055 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.29■□□□□ 0.84
Trdmt1O55055 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trdmt1O55055 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.28■□□□□ 0.84
Trdmt1O55055 Mir6349-201ENSMUST00000184059 97 ntBASIC20.28■□□□□ 0.84
Trdmt1O55055 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trdmt1O55055 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trdmt1O55055 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.27■□□□□ 0.84
Trdmt1O55055 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trdmt1O55055 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trdmt1O55055 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trdmt1O55055 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.27■□□□□ 0.84
Trdmt1O55055 Odf3b-204ENSMUST00000227834 930 ntBASIC20.27■□□□□ 0.84
Trdmt1O55055 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trdmt1O55055 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trdmt1O55055 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trdmt1O55055 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.27■□□□□ 0.83
Trdmt1O55055 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.27■□□□□ 0.83
Trdmt1O55055 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trdmt1O55055 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trdmt1O55055 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Trdmt1O55055 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trdmt1O55055 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trdmt1O55055 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.26■□□□□ 0.83
Trdmt1O55055 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.26■□□□□ 0.83
Trdmt1O55055 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trdmt1O55055 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trdmt1O55055 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trdmt1O55055 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trdmt1O55055 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trdmt1O55055 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trdmt1O55055 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.25■□□□□ 0.83
Trdmt1O55055 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trdmt1O55055 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.24■□□□□ 0.83
Trdmt1O55055 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trdmt1O55055 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trdmt1O55055 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trdmt1O55055 Gm12382-201ENSMUST00000122005 922 ntBASIC20.24■□□□□ 0.83
Trdmt1O55055 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trdmt1O55055 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trdmt1O55055 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trdmt1O55055 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trdmt1O55055 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.23■□□□□ 0.83
Trdmt1O55055 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Gm13559-201ENSMUST00000120476 863 ntBASIC20.23■□□□□ 0.83
Trdmt1O55055 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trdmt1O55055 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trdmt1O55055 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.23■□□□□ 0.83
Trdmt1O55055 Timm23-208ENSMUST00000226683 750 ntBASIC20.23■□□□□ 0.83
Trdmt1O55055 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trdmt1O55055 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trdmt1O55055 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trdmt1O55055 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trdmt1O55055 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trdmt1O55055 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trdmt1O55055 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trdmt1O55055 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.22■□□□□ 0.83
Trdmt1O55055 Gm11539-201ENSMUST00000119837 557 ntBASIC20.22■□□□□ 0.83
Trdmt1O55055 Gm13436-201ENSMUST00000120418 567 ntBASIC20.22■□□□□ 0.83
Trdmt1O55055 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.22■□□□□ 0.83
Trdmt1O55055 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trdmt1O55055 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms