Protein–RNA interactions for Protein: O55013

Trappc3, Trafficking protein particle complex subunit 3, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc3O55013 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.65■□□□□ 0.74
Trappc3O55013 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trappc3O55013 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trappc3O55013 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.65■□□□□ 0.74
Trappc3O55013 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.65■□□□□ 0.74
Trappc3O55013 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.65■□□□□ 0.74
Trappc3O55013 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Trappc3O55013 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trappc3O55013 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trappc3O55013 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.65■□□□□ 0.74
Trappc3O55013 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trappc3O55013 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trappc3O55013 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trappc3O55013 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.64■□□□□ 0.74
Trappc3O55013 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trappc3O55013 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trappc3O55013 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc3O55013 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trappc3O55013 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trappc3O55013 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trappc3O55013 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.64■□□□□ 0.73
Trappc3O55013 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc3O55013 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.64■□□□□ 0.73
Trappc3O55013 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc3O55013 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trappc3O55013 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trappc3O55013 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Trappc3O55013 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.63■□□□□ 0.73
Trappc3O55013 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trappc3O55013 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.63■□□□□ 0.73
Trappc3O55013 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trappc3O55013 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.63■□□□□ 0.73
Trappc3O55013 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trappc3O55013 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.62■□□□□ 0.73
Trappc3O55013 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trappc3O55013 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.62■□□□□ 0.73
Trappc3O55013 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trappc3O55013 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.62■□□□□ 0.73
Trappc3O55013 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trappc3O55013 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trappc3O55013 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
Trappc3O55013 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trappc3O55013 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trappc3O55013 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.6■□□□□ 0.73
Trappc3O55013 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trappc3O55013 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.6■□□□□ 0.73
Trappc3O55013 Gm26524-201ENSMUST00000192339 390 ntBASIC19.6■□□□□ 0.73
Trappc3O55013 Rab3c-203ENSMUST00000224180 967 ntBASIC19.6■□□□□ 0.73
Trappc3O55013 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms