Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Banf1O54962 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Banf1O54962 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Banf1O54962 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Banf1O54962 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Banf1O54962 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Banf1O54962 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Banf1O54962 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Banf1O54962 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Banf1O54962 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Banf1O54962 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Banf1O54962 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.63■□□□□ 0.57
Banf1O54962 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.63■□□□□ 0.57
Banf1O54962 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Banf1O54962 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Banf1O54962 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.63■□□□□ 0.57
Banf1O54962 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Banf1O54962 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Banf1O54962 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.63■□□□□ 0.57
Banf1O54962 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Banf1O54962 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.62■□□□□ 0.57
Banf1O54962 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.62■□□□□ 0.57
Banf1O54962 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.62■□□□□ 0.57
Banf1O54962 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Banf1O54962 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.61■□□□□ 0.57
Banf1O54962 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Banf1O54962 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Banf1O54962 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Banf1O54962 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Banf1O54962 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Banf1O54962 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Banf1O54962 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Banf1O54962 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Banf1O54962 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.59■□□□□ 0.57
Banf1O54962 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.59■□□□□ 0.57
Banf1O54962 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.59■□□□□ 0.57
Banf1O54962 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Banf1O54962 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Banf1O54962 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Banf1O54962 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Banf1O54962 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Banf1O54962 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.58■□□□□ 0.56
Banf1O54962 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Banf1O54962 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Banf1O54962 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Banf1O54962 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.57■□□□□ 0.56
Banf1O54962 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Gm13146-201ENSMUST00000118508 780 ntBASIC18.57■□□□□ 0.56
Banf1O54962 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.57■□□□□ 0.56
Banf1O54962 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.57■□□□□ 0.56
Banf1O54962 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Banf1O54962 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Banf1O54962 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms