Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DffbO54788 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
DffbO54788 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DffbO54788 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.71■□□□□ 0.11
DffbO54788 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DffbO54788 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DffbO54788 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DffbO54788 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
DffbO54788 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DffbO54788 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
DffbO54788 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.7■□□□□ 0.1
DffbO54788 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.7■□□□□ 0.1
DffbO54788 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.7■□□□□ 0.1
DffbO54788 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.7■□□□□ 0.1
DffbO54788 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.7■□□□□ 0.1
DffbO54788 Gm40848-201ENSMUST00000221998 324 ntBASIC15.7■□□□□ 0.1
DffbO54788 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.7■□□□□ 0.1
DffbO54788 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DffbO54788 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DffbO54788 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.69■□□□□ 0.1
DffbO54788 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.69■□□□□ 0.1
DffbO54788 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.69■□□□□ 0.1
DffbO54788 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DffbO54788 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
DffbO54788 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.69■□□□□ 0.1
DffbO54788 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.69■□□□□ 0.1
DffbO54788 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.69■□□□□ 0.1
DffbO54788 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DffbO54788 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
DffbO54788 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DffbO54788 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
DffbO54788 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.68■□□□□ 0.1
DffbO54788 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DffbO54788 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
DffbO54788 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.68■□□□□ 0.1
DffbO54788 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
DffbO54788 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
DffbO54788 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DffbO54788 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.67■□□□□ 0.1
DffbO54788 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
DffbO54788 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
DffbO54788 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.67■□□□□ 0.1
DffbO54788 Gm27454-201ENSMUST00000185090 204 ntBASIC15.67■□□□□ 0.1
DffbO54788 Gm38205-201ENSMUST00000192243 258 ntBASIC15.67■□□□□ 0.1
DffbO54788 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.67■□□□□ 0.1
DffbO54788 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DffbO54788 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.67■□□□□ 0.1
DffbO54788 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.67■□□□□ 0.1
DffbO54788 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms