Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.33■□□□□ 0.2
Lsm2O35900 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.33■□□□□ 0.2
Lsm2O35900 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm2O35900 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lsm2O35900 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Lsm2O35900 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.32■□□□□ 0.2
Lsm2O35900 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.32■□□□□ 0.2
Lsm2O35900 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm2O35900 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm2O35900 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm2O35900 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lsm2O35900 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lsm2O35900 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm2O35900 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm2O35900 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.31■□□□□ 0.2
Lsm2O35900 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lsm2O35900 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.31■□□□□ 0.2
Lsm2O35900 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm2O35900 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm2O35900 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lsm2O35900 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.3■□□□□ 0.2
Lsm2O35900 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.3■□□□□ 0.2
Lsm2O35900 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.3■□□□□ 0.2
Lsm2O35900 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Lsm2O35900 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm2O35900 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm2O35900 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.29■□□□□ 0.2
Lsm2O35900 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Gm15546-201ENSMUST00000122095 826 ntBASIC16.29■□□□□ 0.2
Lsm2O35900 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lsm2O35900 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm2O35900 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm2O35900 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lsm2O35900 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Gm12251-201ENSMUST00000117893 792 ntBASIC16.28■□□□□ 0.2
Lsm2O35900 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm2O35900 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lsm2O35900 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm2O35900 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms