Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.06■□□□□ 0.8
Sptlc1O35704 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sptlc1O35704 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sptlc1O35704 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.06■□□□□ 0.8
Sptlc1O35704 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.06■□□□□ 0.8
Sptlc1O35704 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.06■□□□□ 0.8
Sptlc1O35704 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sptlc1O35704 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Sptlc1O35704 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sptlc1O35704 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.05■□□□□ 0.8
Sptlc1O35704 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Sptlc1O35704 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sptlc1O35704 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sptlc1O35704 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Gm13836-201ENSMUST00000121159 501 ntBASIC20.04■□□□□ 0.8
Sptlc1O35704 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.04■□□□□ 0.8
Sptlc1O35704 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sptlc1O35704 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Sptlc1O35704 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Mir5122-201ENSMUST00000175004 89 ntBASIC20.03■□□□□ 0.8
Sptlc1O35704 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.03■□□□□ 0.8
Sptlc1O35704 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sptlc1O35704 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sptlc1O35704 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.02■□□□□ 0.8
Sptlc1O35704 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Sptlc1O35704 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sptlc1O35704 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sptlc1O35704 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sptlc1O35704 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sptlc1O35704 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sptlc1O35704 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Sptlc1O35704 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sptlc1O35704 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sptlc1O35704 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Sptlc1O35704 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sptlc1O35704 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.01■□□□□ 0.79
Sptlc1O35704 Gm38285-201ENSMUST00000192928 922 ntBASIC20.01■□□□□ 0.79
Sptlc1O35704 Gm10138-203ENSMUST00000206952 366 ntBASIC20.01■□□□□ 0.79
Sptlc1O35704 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sptlc1O35704 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Sptlc1O35704 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sptlc1O35704 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Sptlc1O35704 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Sptlc1O35704 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20■□□□□ 0.79
Sptlc1O35704 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20■□□□□ 0.79
Sptlc1O35704 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20■□□□□ 0.79
Sptlc1O35704 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Sptlc1O35704 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sptlc1O35704 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20■□□□□ 0.79
Sptlc1O35704 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sptlc1O35704 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Sptlc1O35704 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.99■□□□□ 0.79
Sptlc1O35704 Gm43183-201ENSMUST00000200632 547 ntBASIC19.99■□□□□ 0.79
Sptlc1O35704 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sptlc1O35704 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sptlc1O35704 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sptlc1O35704 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sptlc1O35704 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sptlc1O35704 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.98■□□□□ 0.79
Sptlc1O35704 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms