Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Clk4O35493 Nespas-201ENSMUST00000143738 1083 ntBASIC17.54■□□□□ 0.4
Clk4O35493 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk4O35493 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clk4O35493 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk4O35493 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk4O35493 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk4O35493 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.54■□□□□ 0.4
Clk4O35493 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Clk4O35493 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clk4O35493 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.54■□□□□ 0.4
Clk4O35493 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Clk4O35493 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.53■□□□□ 0.4
Clk4O35493 Gm6365-201ENSMUST00000054711 744 ntBASIC17.53■□□□□ 0.4
Clk4O35493 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.53■□□□□ 0.4
Clk4O35493 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk4O35493 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Clk4O35493 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Clk4O35493 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clk4O35493 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clk4O35493 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clk4O35493 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clk4O35493 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clk4O35493 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Clk4O35493 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Clk4O35493 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.51■□□□□ 0.39
Clk4O35493 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.51■□□□□ 0.39
Clk4O35493 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clk4O35493 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.51■□□□□ 0.39
Clk4O35493 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clk4O35493 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.51■□□□□ 0.39
Clk4O35493 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Clk4O35493 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clk4O35493 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.5■□□□□ 0.39
Clk4O35493 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Mir5133-201ENSMUST00000174955 77 ntBASIC17.5■□□□□ 0.39
Clk4O35493 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.5■□□□□ 0.39
Clk4O35493 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Clk4O35493 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk4O35493 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Clk4O35493 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.49■□□□□ 0.39
Clk4O35493 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.49■□□□□ 0.39
Clk4O35493 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clk4O35493 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clk4O35493 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk4O35493 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms