Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cl1O35188 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cl1O35188 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cl1O35188 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cl1O35188 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cx3cl1O35188 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cx3cl1O35188 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cl1O35188 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.2■□□□□ 0.34
Cx3cl1O35188 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cl1O35188 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.19■□□□□ 0.34
Cx3cl1O35188 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.19■□□□□ 0.34
Cx3cl1O35188 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cl1O35188 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.18■□□□□ 0.34
Cx3cl1O35188 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.18■□□□□ 0.34
Cx3cl1O35188 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cl1O35188 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cl1O35188 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cl1O35188 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cx3cl1O35188 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cl1O35188 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.16■□□□□ 0.34
Cx3cl1O35188 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cx3cl1O35188 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.14■□□□□ 0.33
Cx3cl1O35188 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.14■□□□□ 0.33
Cx3cl1O35188 Gm5408-201ENSMUST00000197998 747 ntBASIC17.14■□□□□ 0.33
Cx3cl1O35188 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cl1O35188 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.14■□□□□ 0.33
Cx3cl1O35188 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.14■□□□□ 0.33
Cx3cl1O35188 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms