Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ebf3O08791 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ebf3O08791 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Ebf3O08791 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf3O08791 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.97■□□□□ 0.63
Ebf3O08791 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ebf3O08791 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ebf3O08791 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Ebf3O08791 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.96■□□□□ 0.63
Ebf3O08791 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ebf3O08791 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ebf3O08791 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.96■□□□□ 0.63
Ebf3O08791 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf3O08791 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.95■□□□□ 0.62
Ebf3O08791 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ebf3O08791 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.95■□□□□ 0.62
Ebf3O08791 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.95■□□□□ 0.62
Ebf3O08791 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.95■□□□□ 0.62
Ebf3O08791 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ebf3O08791 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ebf3O08791 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ebf3O08791 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.94■□□□□ 0.62
Ebf3O08791 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf3O08791 Gm10698-201ENSMUST00000182663 604 ntBASIC18.94■□□□□ 0.62
Ebf3O08791 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.94■□□□□ 0.62
Ebf3O08791 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.94■□□□□ 0.62
Ebf3O08791 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf3O08791 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf3O08791 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf3O08791 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf3O08791 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Ebf3O08791 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ebf3O08791 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ebf3O08791 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ebf3O08791 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.92■□□□□ 0.62
Ebf3O08791 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ebf3O08791 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.92■□□□□ 0.62
Ebf3O08791 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.92■□□□□ 0.62
Ebf3O08791 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.92■□□□□ 0.62
Ebf3O08791 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ebf3O08791 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.92■□□□□ 0.62
Ebf3O08791 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ebf3O08791 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ebf3O08791 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Gm715-201ENSMUST00000117865 831 ntBASIC18.91■□□□□ 0.62
Ebf3O08791 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.91■□□□□ 0.62
Ebf3O08791 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.91■□□□□ 0.62
Ebf3O08791 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ebf3O08791 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms