Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.91■□□□□ 0.62
Gm3336J3QMQ6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3336J3QMQ6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.91■□□□□ 0.62
Gm3336J3QMQ6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.91■□□□□ 0.62
Gm3336J3QMQ6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3336J3QMQ6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm3336J3QMQ6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm3336J3QMQ6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Gm37856-201ENSMUST00000191634 999 ntBASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3336J3QMQ6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3336J3QMQ6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Gm2399-201ENSMUST00000104944 225 ntBASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Gm2559-201ENSMUST00000201323 363 ntBASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3336J3QMQ6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Dio3-201ENSMUST00000097228 1449 ntBASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3336J3QMQ6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3336J3QMQ6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3336J3QMQ6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3336J3QMQ6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms