Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3139J3QK78 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3139J3QK78 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Gm27275-201ENSMUST00000184318 272 ntBASIC18.29■□□□□ 0.52
Gm3139J3QK78 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.29■□□□□ 0.52
Gm3139J3QK78 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.29■□□□□ 0.52
Gm3139J3QK78 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3139J3QK78 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.28■□□□□ 0.52
Gm3139J3QK78 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Gm8520-201ENSMUST00000186517 868 ntBASIC18.28■□□□□ 0.52
Gm3139J3QK78 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.28■□□□□ 0.52
Gm3139J3QK78 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3139J3QK78 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3139J3QK78 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3139J3QK78 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gm3139J3QK78 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3139J3QK78 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3139J3QK78 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3139J3QK78 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3139J3QK78 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.27■□□□□ 0.52
Gm3139J3QK78 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gm3139J3QK78 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Gm3139J3QK78 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3139J3QK78 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.27■□□□□ 0.52
Gm3139J3QK78 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3139J3QK78 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3139J3QK78 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3139J3QK78 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.27■□□□□ 0.51
Gm3139J3QK78 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3139J3QK78 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.26■□□□□ 0.51
Gm3139J3QK78 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3139J3QK78 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm3139J3QK78 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3139J3QK78 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3139J3QK78 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3139J3QK78 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.25■□□□□ 0.51
Gm3139J3QK78 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3139J3QK78 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Gm11249-201ENSMUST00000117071 859 ntBASIC18.24■□□□□ 0.51
Gm3139J3QK78 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Gm13168-201ENSMUST00000121771 632 ntBASIC18.24■□□□□ 0.51
Gm3139J3QK78 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm3139J3QK78 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm3139J3QK78 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms