Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh11xF6ZNL5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh11xF6ZNL5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh11xF6ZNL5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdh11xF6ZNL5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdh11xF6ZNL5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh11xF6ZNL5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh11xF6ZNL5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh11xF6ZNL5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Pcdh11xF6ZNL5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh11xF6ZNL5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh11xF6ZNL5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Gm22325-201ENSMUST00000158904 308 ntBASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh11xF6ZNL5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh11xF6ZNL5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Tgds-204ENSMUST00000228543 1594 ntBASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh11xF6ZNL5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Mir5133-201ENSMUST00000174955 77 ntBASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh11xF6ZNL5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh11xF6ZNL5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh11xF6ZNL5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh11xF6ZNL5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh11xF6ZNL5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh11xF6ZNL5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh11xF6ZNL5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh11xF6ZNL5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms