Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm10542F6XDR3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.73□□□□□ -0.37
Gm10542F6XDR3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Spcs1-204ENSMUST00000226782 949 ntBASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm10542F6XDR3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Fst-202ENSMUST00000223640 2612 ntBASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Gm12922-201ENSMUST00000120626 809 ntBASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.72□□□□□ -0.37
Gm10542F6XDR3 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Gm7860-201ENSMUST00000121190 879 ntBASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Gm43137-201ENSMUST00000198052 594 ntBASIC12.71□□□□□ -0.37
Gm10542F6XDR3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm10542F6XDR3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm10542F6XDR3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm10542F6XDR3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm10542F6XDR3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm10542F6XDR3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gm10542F6XDR3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Gm10542F6XDR3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm10542F6XDR3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms