Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc149F6V035 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.59■□□□□ 0.57
Ccdc149F6V035 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ccdc149F6V035 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccdc149F6V035 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc149F6V035 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc149F6V035 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.58■□□□□ 0.56
Ccdc149F6V035 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc149F6V035 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc149F6V035 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.57■□□□□ 0.56
Ccdc149F6V035 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc149F6V035 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.56■□□□□ 0.56
Ccdc149F6V035 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Mir1199-201ENSMUST00000117015 119 ntBASIC18.56■□□□□ 0.56
Ccdc149F6V035 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc149F6V035 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc149F6V035 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Gm715-201ENSMUST00000117865 831 ntBASIC18.55■□□□□ 0.56
Ccdc149F6V035 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.55■□□□□ 0.56
Ccdc149F6V035 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.55■□□□□ 0.56
Ccdc149F6V035 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc149F6V035 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.54■□□□□ 0.56
Ccdc149F6V035 Gm10138-203ENSMUST00000206952 366 ntBASIC18.54■□□□□ 0.56
Ccdc149F6V035 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc149F6V035 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Gm38285-201ENSMUST00000192928 922 ntBASIC18.53■□□□□ 0.56
Ccdc149F6V035 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.53■□□□□ 0.56
Ccdc149F6V035 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc149F6V035 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms