Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm8879F6R3J9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm8879F6R3J9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm8879F6R3J9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm8879F6R3J9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm8879F6R3J9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm8879F6R3J9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm8879F6R3J9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm8879F6R3J9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gm8879F6R3J9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm8879F6R3J9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm8879F6R3J9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm8879F6R3J9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm8879F6R3J9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gm8879F6R3J9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm8879F6R3J9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Gm8879F6R3J9 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.52■□□□□ 0.39
Gm8879F6R3J9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm8879F6R3J9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm8879F6R3J9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm8879F6R3J9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Rarb-207ENSMUST00000225921 2756 ntBASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Gm43173-201ENSMUST00000202246 593 ntBASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm8879F6R3J9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm8879F6R3J9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm8879F6R3J9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm8879F6R3J9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Gm8879F6R3J9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm8879F6R3J9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm8879F6R3J9 Gm12821-201ENSMUST00000120022 600 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms