Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm1E9Q9Q2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
R3hdm1E9Q9Q2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm1E9Q9Q2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm1E9Q9Q2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.2■□□□□ 0.82
R3hdm1E9Q9Q2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm1E9Q9Q2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm1E9Q9Q2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm1E9Q9Q2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm1E9Q9Q2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm1E9Q9Q2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
R3hdm1E9Q9Q2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm1E9Q9Q2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm1E9Q9Q2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.17■□□□□ 0.82
R3hdm1E9Q9Q2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm1E9Q9Q2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.15■□□□□ 0.82
R3hdm1E9Q9Q2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm1E9Q9Q2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
R3hdm1E9Q9Q2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.15■□□□□ 0.82
R3hdm1E9Q9Q2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
R3hdm1E9Q9Q2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.15■□□□□ 0.82
R3hdm1E9Q9Q2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm1E9Q9Q2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Gm7367-201ENSMUST00000057611 492 ntBASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm1E9Q9Q2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm1E9Q9Q2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
R3hdm1E9Q9Q2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3hdm1E9Q9Q2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 183.4 ms