Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap3E9PY62 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.21■□□□□ 0.83
Cntnap3E9PY62 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cntnap3E9PY62 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap3E9PY62 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap3E9PY62 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.21■□□□□ 0.83
Cntnap3E9PY62 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cntnap3E9PY62 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 AW822252-206ENSMUST00000208904 237 ntBASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cntnap3E9PY62 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Gm27463-201ENSMUST00000183569 57 ntBASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.18■□□□□ 0.82
Cntnap3E9PY62 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Gm2274-201ENSMUST00000184539 609 ntBASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Cntnap3E9PY62 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Zfp783-201ENSMUST00000095946 670 ntBASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap3E9PY62 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Cntnap3E9PY62 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cntnap3E9PY62 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cntnap3E9PY62 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cntnap3E9PY62 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cntnap3E9PY62 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms