Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ift140E9PY46 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Ift140E9PY46 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC29.32■■■□□ 2.28
Ift140E9PY46 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Ift140E9PY46 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ift140E9PY46 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ift140E9PY46 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ift140E9PY46 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ift140E9PY46 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Ift140E9PY46 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC29.31■■■□□ 2.28
Ift140E9PY46 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ift140E9PY46 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ift140E9PY46 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ift140E9PY46 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Ift140E9PY46 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Ift140E9PY46 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Ift140E9PY46 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ift140E9PY46 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ift140E9PY46 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ift140E9PY46 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ift140E9PY46 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ift140E9PY46 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC29.29■■■□□ 2.28
Ift140E9PY46 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
Ift140E9PY46 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Gm29518-201ENSMUST00000190858 372 ntBASIC29.29■■■□□ 2.28
Ift140E9PY46 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ift140E9PY46 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ift140E9PY46 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ift140E9PY46 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ift140E9PY46 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
Ift140E9PY46 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ift140E9PY46 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC29.28■■■□□ 2.28
Ift140E9PY46 Gm9013-201ENSMUST00000132939 882 ntBASIC29.28■■■□□ 2.28
Ift140E9PY46 Gm25925-201ENSMUST00000158314 306 ntBASIC29.28■■■□□ 2.28
Ift140E9PY46 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC29.28■■■□□ 2.28
Ift140E9PY46 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ift140E9PY46 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ift140E9PY46 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Ift140E9PY46 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Ift140E9PY46 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Ift140E9PY46 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
Ift140E9PY46 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.27■■■□□ 2.28
Ift140E9PY46 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ift140E9PY46 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
Ift140E9PY46 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ift140E9PY46 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ift140E9PY46 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Ift140E9PY46 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ift140E9PY46 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Ift140E9PY46 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC29.25■■■□□ 2.27
Ift140E9PY46 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ift140E9PY46 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ift140E9PY46 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Ift140E9PY46 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC29.24■■■□□ 2.27
Ift140E9PY46 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC29.24■■■□□ 2.27
Ift140E9PY46 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC29.24■■■□□ 2.27
Ift140E9PY46 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift140E9PY46 Gm27357-201ENSMUST00000183754 135 ntBASIC29.23■■■□□ 2.27
Ift140E9PY46 Gm37805-201ENSMUST00000192612 1094 ntBASIC29.23■■■□□ 2.27
Ift140E9PY46 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC29.23■■■□□ 2.27
Ift140E9PY46 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC29.23■■■□□ 2.27
Ift140E9PY46 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ift140E9PY46 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC29.23■■■□□ 2.27
Ift140E9PY46 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ift140E9PY46 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ift140E9PY46 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ift140E9PY46 Gm21559-201ENSMUST00000220638 855 ntBASIC29.22■■■□□ 2.27
Ift140E9PY46 Gm8587-201ENSMUST00000076538 843 ntBASIC29.22■■■□□ 2.27
Ift140E9PY46 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ift140E9PY46 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Ift140E9PY46 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC29.21■■■□□ 2.27
Ift140E9PY46 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ift140E9PY46 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Ift140E9PY46 AC126028.2-201ENSMUST00000228100 1833 ntBASIC29.2■■■□□ 2.27
Ift140E9PY46 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC29.2■■■□□ 2.26
Ift140E9PY46 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC29.2■■■□□ 2.26
Ift140E9PY46 Gm17808-201ENSMUST00000200859 894 ntBASIC29.2■■■□□ 2.26
Ift140E9PY46 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC29.2■■■□□ 2.26
Ift140E9PY46 Gm7370-201ENSMUST00000219471 767 ntBASIC29.2■■■□□ 2.26
Ift140E9PY46 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ift140E9PY46 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ift140E9PY46 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ift140E9PY46 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ift140E9PY46 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ift140E9PY46 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms