Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sptbn4E9PX29 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sptbn4E9PX29 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm16061-201ENSMUST00000122167 857 ntBASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm12085-201ENSMUST00000119263 940 ntBASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm38285-201ENSMUST00000192928 922 ntBASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.56■□□□□ 0.24
Sptbn4E9PX29 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Gm28659-201ENSMUST00000188013 759 ntBASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Gm18206-201ENSMUST00000207027 926 ntBASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sptbn4E9PX29 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.54■□□□□ 0.24
Sptbn4E9PX29 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sptbn4E9PX29 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Mir6349-201ENSMUST00000184059 97 ntBASIC16.53■□□□□ 0.24
Sptbn4E9PX29 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sptbn4E9PX29 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.52■□□□□ 0.24
Sptbn4E9PX29 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.52■□□□□ 0.24
Sptbn4E9PX29 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sptbn4E9PX29 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sptbn4E9PX29 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sptbn4E9PX29 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sptbn4E9PX29 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sptbn4E9PX29 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sptbn4E9PX29 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms