Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank1D3YZU1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.39■□□□□ 0.21
Shank1D3YZU1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.39■□□□□ 0.21
Shank1D3YZU1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank1D3YZU1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shank1D3YZU1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Gm42545-201ENSMUST00000202755 922 ntBASIC16.38■□□□□ 0.21
Shank1D3YZU1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Gm6345-202ENSMUST00000180900 204 ntBASIC16.38■□□□□ 0.21
Shank1D3YZU1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.38■□□□□ 0.21
Shank1D3YZU1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.37■□□□□ 0.21
Shank1D3YZU1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.37■□□□□ 0.21
Shank1D3YZU1 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.37■□□□□ 0.21
Shank1D3YZU1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Shank1D3YZU1 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.36■□□□□ 0.21
Shank1D3YZU1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.36■□□□□ 0.21
Shank1D3YZU1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Shank1D3YZU1 Gm18032-201ENSMUST00000222541 538 ntBASIC16.36■□□□□ 0.21
Shank1D3YZU1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Gm15375-201ENSMUST00000119510 849 ntBASIC16.35■□□□□ 0.21
Shank1D3YZU1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Shank1D3YZU1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Shank1D3YZU1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Gm37292-201ENSMUST00000192062 758 ntBASIC16.34■□□□□ 0.21
Shank1D3YZU1 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.34■□□□□ 0.21
Shank1D3YZU1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shank1D3YZU1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shank1D3YZU1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shank1D3YZU1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shank1D3YZU1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Shank1D3YZU1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.33■□□□□ 0.21
Shank1D3YZU1 Gm12382-201ENSMUST00000122005 922 ntBASIC16.33■□□□□ 0.2
Shank1D3YZU1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shank1D3YZU1 Ank2-226ENSMUST00000189368 339 ntBASIC16.33■□□□□ 0.2
Shank1D3YZU1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.33■□□□□ 0.2
Shank1D3YZU1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank1D3YZU1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank1D3YZU1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank1D3YZU1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms