Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lonrf1D3YY23 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.9■□□□□ 0.62
Lonrf1D3YY23 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lonrf1D3YY23 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lonrf1D3YY23 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Gm13534-201ENSMUST00000121169 513 ntBASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lonrf1D3YY23 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lonrf1D3YY23 Fst-202ENSMUST00000223640 2612 ntBASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lonrf1D3YY23 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lonrf1D3YY23 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Gm13234-201ENSMUST00000120010 747 ntBASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lonrf1D3YY23 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lonrf1D3YY23 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms