Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Hmcn1D3YXG0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Gm17808-201ENSMUST00000200859 894 ntBASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Gm38027-201ENSMUST00000192315 235 ntBASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Vti1a-206ENSMUST00000225529 1244 ntBASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Gm13127-201ENSMUST00000118978 1389 ntBASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Gm2756-201ENSMUST00000195851 400 ntBASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hmcn1D3YXG0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hmcn1D3YXG0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Spsb2-203ENSMUST00000112473 1322 ntBASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC5.33□□□□□ -1.56
Hmcn1D3YXG0 Gm2213-201ENSMUST00000197485 688 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms