Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt28A6BLY7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Krt28A6BLY7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Krt28A6BLY7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.39■□□□□ 0.85
Krt28A6BLY7 Mir5130-201ENSMUST00000175160 84 ntBASIC20.39■□□□□ 0.85
Krt28A6BLY7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt28A6BLY7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt28A6BLY7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Krt28A6BLY7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Krt28A6BLY7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt28A6BLY7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt28A6BLY7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Krt28A6BLY7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt28A6BLY7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Krt28A6BLY7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Krt28A6BLY7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Krt28A6BLY7 Gm2274-201ENSMUST00000184539 609 ntBASIC20.36■□□□□ 0.85
Krt28A6BLY7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.36■□□□□ 0.85
Krt28A6BLY7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt28A6BLY7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.36■□□□□ 0.85
Krt28A6BLY7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.36■□□□□ 0.85
Krt28A6BLY7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krt28A6BLY7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.34■□□□□ 0.85
Krt28A6BLY7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krt28A6BLY7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krt28A6BLY7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Krt28A6BLY7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Krt28A6BLY7 Gm12085-201ENSMUST00000119263 940 ntBASIC20.33■□□□□ 0.85
Krt28A6BLY7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.33■□□□□ 0.85
Krt28A6BLY7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.33■□□□□ 0.85
Krt28A6BLY7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.33■□□□□ 0.85
Krt28A6BLY7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Krt28A6BLY7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt28A6BLY7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Krt28A6BLY7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Krt28A6BLY7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt28A6BLY7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krt28A6BLY7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt28A6BLY7 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.32■□□□□ 0.84
Krt28A6BLY7 Gm25016-201ENSMUST00000158399 131 ntBASIC20.32■□□□□ 0.84
Krt28A6BLY7 Gm22697-201ENSMUST00000175194 63 ntBASIC20.32■□□□□ 0.84
Krt28A6BLY7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt28A6BLY7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Krt28A6BLY7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Krt28A6BLY7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt28A6BLY7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt28A6BLY7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt28A6BLY7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms