Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Gm10654-201ENSMUST00000098653 1633 ntBASIC9.76□□□□□ -0.85
Ubr4A2AN08 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Gm15794-201ENSMUST00000120182 631 ntBASIC9.76□□□□□ -0.85
Ubr4A2AN08 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr4A2AN08 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr4A2AN08 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Gm2756-201ENSMUST00000195851 400 ntBASIC9.74□□□□□ -0.85
Ubr4A2AN08 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Gm11452-201ENSMUST00000122376 690 ntBASIC9.74□□□□□ -0.85
Ubr4A2AN08 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.74□□□□□ -0.85
Ubr4A2AN08 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Gm11860-201ENSMUST00000122346 1010 ntBASIC9.74□□□□□ -0.85
Ubr4A2AN08 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr4A2AN08 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC9.73□□□□□ -0.85
Ubr4A2AN08 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.73□□□□□ -0.85
Ubr4A2AN08 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Mir5131-201ENSMUST00000175426 93 ntBASIC9.73□□□□□ -0.85
Ubr4A2AN08 Gm26971-201ENSMUST00000182423 1072 ntBASIC9.73□□□□□ -0.85
Ubr4A2AN08 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.73□□□□□ -0.85
Ubr4A2AN08 AC166341.7-201ENSMUST00000221698 126 ntBASIC9.73□□□□□ -0.85
Ubr4A2AN08 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ubr4A2AN08 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Gm20100-201ENSMUST00000209418 2272 ntBASIC9.72□□□□□ -0.85
Ubr4A2AN08 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC9.72□□□□□ -0.85
Ubr4A2AN08 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ubr4A2AN08 Gm27389-201ENSMUST00000183622 195 ntBASIC9.72□□□□□ -0.85
Ubr4A2AN08 Gm5364-201ENSMUST00000216789 889 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms