Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC29.26■■■□□ 2.27
Shroom2A2ALU4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Shroom2A2ALU4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Shroom2A2ALU4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Gm11950-201ENSMUST00000121615 838 ntBASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC29.25■■■□□ 2.27
Shroom2A2ALU4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shroom2A2ALU4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Shroom2A2ALU4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Gm27389-201ENSMUST00000183622 195 ntBASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Mir1668-201ENSMUST00000184114 107 ntBASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
Shroom2A2ALU4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Gm18733-201ENSMUST00000173950 856 ntBASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shroom2A2ALU4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Shroom2A2ALU4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Shroom2A2ALU4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Shroom2A2ALU4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC29.21■■■□□ 2.27
Shroom2A2ALU4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
Shroom2A2ALU4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Shroom2A2ALU4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
Shroom2A2ALU4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Shroom2A2ALU4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Shroom2A2ALU4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Shroom2A2ALU4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Shroom2A2ALU4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC29.2■■■□□ 2.26
Shroom2A2ALU4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Shroom2A2ALU4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Shroom2A2ALU4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Shroom2A2ALU4 Gm27459-201ENSMUST00000184860 107 ntBASIC29.19■■■□□ 2.26
Shroom2A2ALU4 Gm18206-201ENSMUST00000207027 926 ntBASIC29.19■■■□□ 2.26
Shroom2A2ALU4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Shroom2A2ALU4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
Shroom2A2ALU4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Shroom2A2ALU4 Gm13474-201ENSMUST00000122466 815 ntBASIC29.18■■■□□ 2.26
Shroom2A2ALU4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Shroom2A2ALU4 Gm5864-201ENSMUST00000202263 970 ntBASIC29.18■■■□□ 2.26
Shroom2A2ALU4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
Shroom2A2ALU4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Shroom2A2ALU4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC29.18■■■□□ 2.26
Shroom2A2ALU4 Dmtn-209ENSMUST00000228295 2572 ntBASIC29.17■■■□□ 2.26
Shroom2A2ALU4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC29.17■■■□□ 2.26
Shroom2A2ALU4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC29.16■■■□□ 2.26
Shroom2A2ALU4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Shroom2A2ALU4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC29.15■■■□□ 2.26
Shroom2A2ALU4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Shroom2A2ALU4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms