Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm22238-201ENSMUST00000175222 88 ntBASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav3n-3A0A0G2JEM0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.83□□□□□ -0.19
Trav3n-3A0A0G2JEM0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3n-3A0A0G2JEM0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms