Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv4-50A0A0B4J1J0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 AV356131-201ENSMUST00000206201 750 ntBASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv4-50A0A0B4J1J0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms