Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Haglr-201ENSMUST00000100000 2085 ntBASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv13-3A0A0B4J1H2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms