Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv1A0A0B4J1G7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv1A0A0B4J1G7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Gm27454-201ENSMUST00000185090 204 ntBASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv1A0A0B4J1G7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Mir7075-201ENSMUST00000184187 82 ntBASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv1A0A0B4J1G7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv1A0A0B4J1G7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv1A0A0B4J1G7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv1A0A0B4J1G7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trbv1A0A0B4J1G7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms