Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
BC053393A0A0B4J1F6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BC053393A0A0B4J1F6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BC053393A0A0B4J1F6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BC053393A0A0B4J1F6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Smad6-203ENSMUST00000179458 273 ntBASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BC053393A0A0B4J1F6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Gm11421-201ENSMUST00000122124 294 ntBASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Gm43173-201ENSMUST00000202246 593 ntBASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Gm40848-201ENSMUST00000221998 324 ntBASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Gm6139-201ENSMUST00000079261 882 ntBASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BC053393A0A0B4J1F6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms