Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv3A0A0A6YYE2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv3A0A0A6YYE2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv3A0A0A6YYE2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv3A0A0A6YYE2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv3A0A0A6YYE2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv3A0A0A6YYE2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.12□□□□□ -0.15
Trbv3A0A0A6YYE2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms