Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6-5A0A075B6B5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-5A0A075B6B5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-5A0A075B6B5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-5A0A075B6B5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trav6-5A0A075B6B5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav6-5A0A075B6B5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-5A0A075B6B5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-5A0A075B6B5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms