Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Trav12d-3A0A075B6A4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-3A0A075B6A4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-3A0A075B6A4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-3A0A075B6A4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12d-3A0A075B6A4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Dancr-204ENSMUST00000132389 2347 ntBASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12d-3A0A075B6A4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12d-3A0A075B6A4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav12d-3A0A075B6A4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12d-3A0A075B6A4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12d-3A0A075B6A4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms