Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-3A0A075B648 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Trav12-3A0A075B648 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-3A0A075B648 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12-3A0A075B648 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Gm11599-201ENSMUST00000118720 878 ntBASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav12-3A0A075B648 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav12-3A0A075B648 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-3A0A075B648 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms