Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13-1A0A075B644 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Gm4968-201ENSMUST00000071458 858 ntBASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13-1A0A075B644 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Gm45640-201ENSMUST00000210665 1896 ntBASIC13□□□□□ -0.33
Trav13-1A0A075B644 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Gm43859-201ENSMUST00000200075 1412 ntBASIC13□□□□□ -0.33
Trav13-1A0A075B644 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Gm26971-201ENSMUST00000182423 1072 ntBASIC13□□□□□ -0.33
Trav13-1A0A075B644 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13□□□□□ -0.33
Trav13-1A0A075B644 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13□□□□□ -0.33
Trav13-1A0A075B644 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13-1A0A075B644 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13-1A0A075B644 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13-1A0A075B644 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms