Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav4-2A0A075B638 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-2A0A075B638 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-2A0A075B638 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Gm22238-201ENSMUST00000175222 88 ntBASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.52□□□□□ -0.09
Trav4-2A0A075B638 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-2A0A075B638 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-2A0A075B638 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms