Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8n-2A0A075B633 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Gm12382-201ENSMUST00000122005 922 ntBASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Gm38285-201ENSMUST00000192928 922 ntBASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Gm42545-201ENSMUST00000202755 922 ntBASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8n-2A0A075B633 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Timm23-208ENSMUST00000226683 750 ntBASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Odf3b-204ENSMUST00000227834 930 ntBASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8n-2A0A075B633 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.79■□□□□ 0.28
Trav8n-2A0A075B633 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Mir6349-201ENSMUST00000184059 97 ntBASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8n-2A0A075B633 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8n-2A0A075B633 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms