Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Gm9988-201ENSMUST00000069786 435 ntBASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav9-1A0A075B601 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Fst-202ENSMUST00000223640 2612 ntBASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9-1A0A075B601 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9-1A0A075B601 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Reep4-203ENSMUST00000226563 1444 ntBASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav9-1A0A075B601 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms