Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5-1A0A075B5Z7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5-1A0A075B5Z7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trav5-1A0A075B5Z7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5-1A0A075B5Z7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav5-1A0A075B5Z7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-1A0A075B5Z7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm13168-201ENSMUST00000121771 632 ntBASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-1A0A075B5Z7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm27275-201ENSMUST00000184318 272 ntBASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm18666-201ENSMUST00000190039 958 ntBASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-1A0A075B5Z7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm22240-201ENSMUST00000175225 82 ntBASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5-1A0A075B5Z7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms