Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Trbv4A0A075B5I2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Gm22325-201ENSMUST00000158904 308 ntBASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Gm8495-201ENSMUST00000188740 694 ntBASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv4A0A075B5I2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv4A0A075B5I2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trbv4A0A075B5I2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Fst-202ENSMUST00000223640 2612 ntBASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Gm42569-201ENSMUST00000200539 472 ntBASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv4A0A075B5I2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv4A0A075B5I2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv4A0A075B5I2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv4A0A075B5I2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms