Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9985-201ENSMUST00000044101 510 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm24924-201ENSMUST00000084007 164 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdc40Q9DC48 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm22671-201ENSMUST00000104420 134 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm12903-201ENSMUST00000121015 544 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm13940-201ENSMUST00000121023 301 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm10913-201ENSMUST00000133732 463 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm38373-201ENSMUST00000192042 288 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm8275-201ENSMUST00000219732 424 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Olfr683-201ENSMUST00000061284 960 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.54□□□□□ -1.36
Cdc40Q9DC48 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm14489-201ENSMUST00000120868 901 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm12321-201ENSMUST00000121485 804 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm12754-201ENSMUST00000121908 454 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm19840-201ENSMUST00000169624 882 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Mir378d-201ENSMUST00000184232 110 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm29354-201ENSMUST00000187613 696 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm37322-201ENSMUST00000193409 337 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm45100-201ENSMUST00000209153 391 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms