Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm13163-201ENSMUST00000119875 336 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm14796-201ENSMUST00000121216 959 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm14048-201ENSMUST00000121864 1268 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm24057-201ENSMUST00000158616 302 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm8192-201ENSMUST00000182196 958 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm28070-201ENSMUST00000191502 445 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm8101-201ENSMUST00000192796 478 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm43926-201ENSMUST00000203978 430 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm19217-201ENSMUST00000218238 328 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm46231-201ENSMUST00000220152 314 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 AV026068-219ENSMUST00000224148 933 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Ermard-209ENSMUST00000226561 1019 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm24046-201ENSMUST00000083111 165 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.57□□□□□ -1.36
Use1Q9CQ56 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Use1Q9CQ56 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm17170-201ENSMUST00000112785 316 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm12075-201ENSMUST00000117426 397 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm15188-201ENSMUST00000121264 704 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm3208-201ENSMUST00000168281 427 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm5181-201ENSMUST00000183140 971 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm27401-201ENSMUST00000184052 173 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Mir6357-201ENSMUST00000184246 104 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm2566-201ENSMUST00000201267 431 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm42673-201ENSMUST00000202676 337 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm18960-201ENSMUST00000222962 713 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm20900-201ENSMUST00000078729 472 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.56□□□□□ -1.36
Use1Q9CQ56 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Use1Q9CQ56 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Use1Q9CQ56 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms