Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim11Q99PQ2 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim11Q99PQ2 Gm14797-201ENSMUST00000119378 1480 ntBASIC8.57□□□□□ -1.04
Trim11Q99PQ2 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim11Q99PQ2 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim11Q99PQ2 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim11Q99PQ2 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm12931-201ENSMUST00000117046 324 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm12365-201ENSMUST00000117931 568 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm14630-201ENSMUST00000118057 246 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm12593-201ENSMUST00000120981 743 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm11990-201ENSMUST00000121505 897 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mir3078-201ENSMUST00000175231 87 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm20702-201ENSMUST00000176181 460 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm6931-201ENSMUST00000183103 371 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm37883-201ENSMUST00000194970 725 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mir1897-202ENSMUST00000198006 79 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm7478-201ENSMUST00000201054 581 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm18839-201ENSMUST00000204292 670 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 AC159819.1-201ENSMUST00000213911 328 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm19987-201ENSMUST00000216339 499 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm18292-201ENSMUST00000216673 919 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm33778-201ENSMUST00000216884 704 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm9472-201ENSMUST00000221625 526 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 CT030254.3-201ENSMUST00000225959 1231 ntBASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Trim11Q99PQ2 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm37060-201ENSMUST00000194997 2397 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm12817-201ENSMUST00000119622 610 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm11809-201ENSMUST00000120923 950 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm4891-201ENSMUST00000182279 912 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm28918-201ENSMUST00000188822 699 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm19035-202ENSMUST00000194575 959 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm42977-201ENSMUST00000197497 144 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm7565-201ENSMUST00000203611 623 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm19039-201ENSMUST00000204363 575 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm18207-201ENSMUST00000205486 526 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 AC158536.1-201ENSMUST00000222510 256 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms