Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm12804-201ENSMUST00000121030 999 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm15316-201ENSMUST00000121082 421 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm13366-201ENSMUST00000122198 970 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm26025-201ENSMUST00000158655 271 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm4585-201ENSMUST00000207218 452 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm45478-201ENSMUST00000209472 211 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 AC124408.1-201ENSMUST00000228938 707 ntBASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.26□□□□□ -1.09
Vps53Q8CCB4 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AC156163.1-201ENSMUST00000215598 3369 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm8312-201ENSMUST00000119380 618 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm14202-201ENSMUST00000120121 311 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm12929-201ENSMUST00000122406 370 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm25660-201ENSMUST00000158470 104 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm8185-201ENSMUST00000160999 669 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm24155-201ENSMUST00000175259 110 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm44279-201ENSMUST00000205154 472 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AC122305.2-201ENSMUST00000215148 834 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AC172027.1-201ENSMUST00000217659 337 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm19217-201ENSMUST00000218238 328 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AV026068-229ENSMUST00000225516 595 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Vps53Q8CCB4 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms