Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm13921-201ENSMUST00000119411 463 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm11955-201ENSMUST00000119801 470 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm4773-201ENSMUST00000120392 702 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm13586-201ENSMUST00000121784 464 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm25437-201ENSMUST00000158282 132 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm17129-201ENSMUST00000168168 505 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm18128-201ENSMUST00000172625 511 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm5698-201ENSMUST00000178317 724 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm17895-201ENSMUST00000194028 874 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm37339-201ENSMUST00000194142 392 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm37908-201ENSMUST00000195828 470 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm43840-201ENSMUST00000199444 484 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm43846-201ENSMUST00000200502 932 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm43227-201ENSMUST00000202239 677 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC158531.2-201ENSMUST00000224264 473 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 CT010480.5-201ENSMUST00000225026 217 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC119573.1-201ENSMUST00000227960 757 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 AC112142.1-206ENSMUST00000228136 982 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm6807-201ENSMUST00000077435 888 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm8728-201ENSMUST00000207367 2178 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm8486-201ENSMUST00000207508 2171 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm8685-201ENSMUST00000207567 2183 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm16443-201ENSMUST00000207909 2184 ntBASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim47Q8C0E3 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 AC125095.1-201ENSMUST00000228387 2020 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm23587-201ENSMUST00000157658 84 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm23663-201ENSMUST00000158045 80 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm20396-201ENSMUST00000173358 745 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Mir3072-201ENSMUST00000175610 83 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm27332-201ENSMUST00000184893 112 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm29144-201ENSMUST00000189235 339 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm29238-201ENSMUST00000189709 695 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm28607-201ENSMUST00000190142 339 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm28121-201ENSMUST00000191420 339 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm18207-201ENSMUST00000205486 526 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm9973-202ENSMUST00000220926 166 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm7239-201ENSMUST00000220981 860 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 CT030238.4-201ENSMUST00000228579 801 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 125.2 ms