Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm22781-201ENSMUST00000104083 137 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm25311-201ENSMUST00000104136 132 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm26419-201ENSMUST00000104272 133 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm13744-201ENSMUST00000118953 850 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm3760-201ENSMUST00000167475 804 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm25574-201ENSMUST00000175245 249 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm29470-201ENSMUST00000188007 696 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm11903-201ENSMUST00000118958 727 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm12104-201ENSMUST00000120359 979 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm27014-201ENSMUST00000182658 937 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm43664-201ENSMUST00000196038 734 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm2531-201ENSMUST00000075609 512 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gm24451-201ENSMUST00000083353 133 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trub1Q8C0D0 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.1□□□□□ -1.27
Trub1Q8C0D0 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms