Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm43089-201ENSMUST00000199162 275 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm44374-201ENSMUST00000199821 140 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm43725-201ENSMUST00000200122 369 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm44101-201ENSMUST00000203951 2221 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm13301-201ENSMUST00000121728 2446 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Amy2b-201ENSMUST00000120184 1577 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Snord88a-201ENSMUST00000116723 90 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm14539-201ENSMUST00000117527 174 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm4732-201ENSMUST00000118778 473 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm9440-201ENSMUST00000119667 539 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm11796-201ENSMUST00000120208 972 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm22990-201ENSMUST00000175427 89 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm21877-201ENSMUST00000185640 694 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 AC122844.1-201ENSMUST00000195971 107 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm9504-201ENSMUST00000196322 468 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 AC165349.1-201ENSMUST00000217896 424 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 CT010480.1-201ENSMUST00000223612 363 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 AW822073-201ENSMUST00000075305 555 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC9.63□□□□□ -0.87
Usp40Q8BWR4 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Snhg17-209ENSMUST00000186993 3144 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm43789-201ENSMUST00000199275 2472 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm23768-201ENSMUST00000104440 131 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm14116-201ENSMUST00000117733 805 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm11445-201ENSMUST00000119101 532 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm5345-201ENSMUST00000183076 1014 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm43048-201ENSMUST00000196101 388 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm9367-201ENSMUST00000205703 546 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm19189-201ENSMUST00000221689 754 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 AC163684.1-201ENSMUST00000223766 927 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 AC163667.1-201ENSMUST00000225201 1289 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 AC154640.1-202ENSMUST00000227828 496 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Mir425-201ENSMUST00000083645 85 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms