Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm14380-201ENSMUST00000122298 431 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm20620-201ENSMUST00000177528 168 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm27018-201ENSMUST00000181136 225 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm19035-202ENSMUST00000194575 959 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm43189-201ENSMUST00000196040 3069 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm18469-201ENSMUST00000208850 439 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 AC137902.1-201ENSMUST00000228184 102 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.33□□□□□ -1.08
Chrna5Q2MKA5 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm15216-201ENSMUST00000118058 277 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm7189-201ENSMUST00000119811 429 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm11581-201ENSMUST00000122024 763 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Mir1932-201ENSMUST00000157390 90 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm27299-201ENSMUST00000184593 103 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm38237-201ENSMUST00000193366 376 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm37322-201ENSMUST00000193409 337 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm34768-201ENSMUST00000193884 565 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm37809-201ENSMUST00000195050 931 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.32□□□□□ -1.08
Chrna5Q2MKA5 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm22370-201ENSMUST00000102422 83 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm14695-201ENSMUST00000121721 282 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm24343-201ENSMUST00000158708 111 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm26557-201ENSMUST00000180756 493 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm7266-201ENSMUST00000187999 405 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm30708-201ENSMUST00000202183 312 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 Gm6436-201ENSMUST00000077163 451 ntBASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Chrna5Q2MKA5 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms